Jul 21, 2025 · The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and …

Standard Nucleotide BLAST BLASTN programs search nucleotide databases using a nucleotide query. more...

This title appears on all BLAST results and saved searches. Enter one or more queries in the top text box and one or more subject sequences in the lower text box. Then use the BLAST button at the …

Web BLAST quick start guide New BLAST databases New Guide to BLAST home and search pages Blast report description Blast topics Frequently Asked Questions Getting Help ¶ Write to the help …

The NCBI provides a suite of command-line tools to run BLAST called BLAST+. This allows users to perform BLAST searches on their own server without size, volume and database restrictions.

Local alignments algorithms (such as BLAST) are most often used. A global alignment should only be used on sequences that share significant similarity over most of their extents, and then it will …

Smart Blast searches a protein query against the landmark database Enter Protein Query Sequence

You can expand a cluster on your BLAST results to view and download a report or the sequences of all member proteins, and you can also perform a BLAST alignment of all the members of the cluster.

This blast page allows you to blast a given set of sequences to find matches to those sequences/genes represented by entries in the GEO database. Matching hits will have "E" gif icons links to …

The links in the Basic BLAST section of the Home tab lead to BLAST forms that share a common design. Each form has four sections (examples are from nucleotide BLAST):